J3_8FIZ_007

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

8FIZ|1|AA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8FIZ_007 not in the Motif Atlas

Homologous match to J3_5J7L_007

Geometric discrepancy: 0.4248

The information below is about J3_5J7L_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_82572.1

Basepair signature

cWW-tSH-tWW-F-cWW-tHW-F-F-cWW

Number of instances in this motif group

2

Unit IDs

8FIZ|1|AA|C|990
8FIZ|1|AA|U|991
8FIZ|1|AA|U|992
8FIZ|1|AA|G|993
*
8FIZ|1|AA|C|1045
8FIZ|1|AA|A|1046
8FIZ|1|AA|G|1047
*
8FIZ|1|AA|C|1210
8FIZ|1|AA|U|1211
8FIZ|1|AA|U|1212
8FIZ|1|AA|A|1213
8FIZ|1|AA|C|1214
8FIZ|1|AA|G|1215

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AF

30S ribosomal protein S14