J3_8FIZ_019

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

8FIZ|1|BA|U|2334

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|BA|C|2295
8FIZ|1|BA|U|2296
8FIZ|1|BA|A|2297
8FIZ|1|BA|A|2298
8FIZ|1|BA|U|2299
*
8FIZ|1|BA|A|2317
8FIZ|1|BA|G|2318
8FIZ|1|BA|G|2319
8FIZ|1|BA|U|2320
8FIZ|1|BA|U|2321
8FIZ|1|BA|A|2322
8FIZ|1|BA|G|2323
*
8FIZ|1|BA|C|2332
8FIZ|1|BA|A|2333
8FIZ|1|BA|U|2334
8FIZ|1|BA|A|2335
8FIZ|1|BA|A|2336
8FIZ|1|BA|G|2337

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BB

Transfer RNA; tRNA

Chain BC

5S ribosomal RNA; 5S rRNA

Chain BG

50S ribosomal protein L5

Chain BH

50S ribosomal protein L18

Chain DD

50S ribosomal protein L27