J3_8FIZ_026

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UUUAAUUC*GAAGAACCUUACCUG*CCAGGGCUA

Length

32 nucleotides

Bulged bases

8FIZ|1|AA|A|975, 8FIZ|1|AA|G|976, 8FIZ|1|AA|A|978

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|AA|U|955
8FIZ|1|AA|U|956
8FIZ|1|AA|U|957
8FIZ|1|AA|A|958
8FIZ|1|AA|A|959
8FIZ|1|AA|U|960
8FIZ|1|AA|U|961
8FIZ|1|AA|C|962
*
8FIZ|1|AA|G|973
8FIZ|1|AA|A|974
8FIZ|1|AA|A|975
8FIZ|1|AA|G|976
8FIZ|1|AA|A|977
8FIZ|1|AA|A|978
8FIZ|1|AA|C|979
8FIZ|1|AA|C|980
8FIZ|1|AA|U|981
8FIZ|1|AA|U|982
8FIZ|1|AA|A|983
8FIZ|1|AA|C|984
8FIZ|1|AA|C|985
8FIZ|1|AA|U|986
8FIZ|1|AA|G|987
*
8FIZ|1|AA|C|1217
8FIZ|1|AA|C|1218
8FIZ|1|AA|A|1219
8FIZ|1|AA|G|1220
8FIZ|1|AA|G|1221
8FIZ|1|AA|G|1222
8FIZ|1|AA|C|1223
8FIZ|1|AA|U|1224
8FIZ|1|AA|A|1225

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AD

30S ribosomal protein S19

Chain AE

30S ribosomal protein S13

Chain AF

30S ribosomal protein S14

Chain AH

30S ribosomal protein S10