J3_8FIZ_027

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUUGACAUCCACG*CGUGAGACAG*CUUACG

Length

29 nucleotides

Bulged bases

8FIZ|1|AA|A|994, 8FIZ|1|AA|C|995, 8FIZ|1|AA|U|1040, 8FIZ|1|AA|A|1042, 8FIZ|1|AA|U|1212, 8FIZ|1|AA|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|AA|C|990
8FIZ|1|AA|U|991
8FIZ|1|AA|U|992
8FIZ|1|AA|G|993
8FIZ|1|AA|A|994
8FIZ|1|AA|C|995
8FIZ|1|AA|A|996
8FIZ|1|AA|U|997
8FIZ|1|AA|C|998
8FIZ|1|AA|C|999
8FIZ|1|AA|A|1000
8FIZ|1|AA|C|1001
8FIZ|1|AA|G|1002
*
8FIZ|1|AA|C|1038
8FIZ|1|AA|G|1039
8FIZ|1|AA|U|1040
8FIZ|1|AA|G|1041
8FIZ|1|AA|A|1042
8FIZ|1|AA|G|1043
8FIZ|1|AA|A|1044
8FIZ|1|AA|C|1045
8FIZ|1|AA|A|1046
8FIZ|1|AA|G|1047
*
8FIZ|1|AA|C|1210
8FIZ|1|AA|U|1211
8FIZ|1|AA|U|1212
8FIZ|1|AA|A|1213
8FIZ|1|AA|C|1214
8FIZ|1|AA|G|1215

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AF

30S ribosomal protein S14