J3_8FIZ_028

3D structure

PDB id

8FIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of E. coli 70S Ribosome containing mRNA and tRNA (in the transcription-translation complex)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UAUC*GAGACUGC*GAGGAAGGUG

Length

22 nucleotides

Bulged bases

8FIZ|1|AA|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FIZ|1|AA|U|1116
8FIZ|1|AA|A|1117
8FIZ|1|AA|U|1118
8FIZ|1|AA|C|1119
*
8FIZ|1|AA|G|1154
8FIZ|1|AA|A|1155
8FIZ|1|AA|G|1156
8FIZ|1|AA|A|1157
8FIZ|1|AA|C|1158
8FIZ|1|AA|U|1159
8FIZ|1|AA|G|1160
8FIZ|1|AA|C|1161
*
8FIZ|1|AA|G|1175
8FIZ|1|AA|A|1176
8FIZ|1|AA|G|1177
8FIZ|1|AA|G|1178
8FIZ|1|AA|A|1179
8FIZ|1|AA|A|1180
8FIZ|1|AA|G|1181
8FIZ|1|AA|G|1182
8FIZ|1|AA|U|1183
8FIZ|1|AA|G|1184

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AF

30S ribosomal protein S14

Chain AH

30S ribosomal protein S10

Chain AJ

30S ribosomal protein S2

Chain AK

30S ribosomal protein S9

Chain AL

30S ribosomal protein S7