J3_8FKQ_008

3D structure

PDB id

8FKQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State A2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

8FKQ|1|L3|C|704, 8FKQ|1|L3|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKQ|1|L3|C|451
8FKQ|1|L3|A|452
8FKQ|1|L3|G|453
8FKQ|1|L3|U|454
8FKQ|1|L3|C|455
*
8FKQ|1|L3|G|701
8FKQ|1|L3|U|702
8FKQ|1|L3|G|703
8FKQ|1|L3|C|704
8FKQ|1|L3|G|705
*
8FKQ|1|L3|C|1292
8FKQ|1|L3|G|1293
8FKQ|1|L3|A|1294
8FKQ|1|L3|C|1295
8FKQ|1|L3|G|1296

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L32

Chain LT

60S ribosomal protein L35a

Chain SC

60S ribosomal protein L6