J3_8FKU_011

3D structure

PDB id

8FKU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.82 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

8FKU|1|L3|C|704, 8FKU|1|L3|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKU|1|L3|C|451
8FKU|1|L3|A|452
8FKU|1|L3|G|453
8FKU|1|L3|U|454
8FKU|1|L3|C|455
*
8FKU|1|L3|G|701
8FKU|1|L3|U|702
8FKU|1|L3|G|703
8FKU|1|L3|C|704
8FKU|1|L3|G|705
*
8FKU|1|L3|C|1292
8FKU|1|L3|G|1293
8FKU|1|L3|A|1294
8FKU|1|L3|C|1295
8FKU|1|L3|G|1296

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L32

Chain LT

60S ribosomal protein L35a

Chain SC

60S ribosomal protein L6