J3_8FKX_003

3D structure

PDB id

8FKX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State E)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.59 Å

Loop

Sequence

UGA*UUAUCC*GGUGUCAGAAA

Length

20 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKX|1|L3|U|3921
8FKX|1|L3|G|3922
8FKX|1|L3|A|3923
*
8FKX|1|L3|U|4188
8FKX|1|L3|U|4189
8FKX|1|L3|A|4339
8FKX|1|L3|U|4340
8FKX|1|L3|C|4341
8FKX|1|L3|C|4342
*
8FKX|1|L3|G|4370
8FKX|1|L3|G|4371
8FKX|1|L3|U|4372
8FKX|1|L3|G|4373
8FKX|1|L3|U|4374
8FKX|1|L3|C|4375
8FKX|1|L3|A|4376
8FKX|1|L3|G|4377
8FKX|1|L3|A|4378
8FKX|1|L3|A|4379
8FKX|1|L3|A|4380

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NH

60S ribosome subunit biogenesis protein NIP7 homolog

Chain ST

Ribosome biogenesis regulatory protein homolog