J3_8FKY_005

3D structure

PDB id

8FKY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State F)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

UGA*UUAUCC*GGUGUCAGAAA

Length

20 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKY|1|L3|U|3921
8FKY|1|L3|G|3922
8FKY|1|L3|A|3923
*
8FKY|1|L3|U|4188
8FKY|1|L3|U|4189
8FKY|1|L3|A|4339
8FKY|1|L3|U|4340
8FKY|1|L3|C|4341
8FKY|1|L3|C|4342
*
8FKY|1|L3|G|4370
8FKY|1|L3|G|4371
8FKY|1|L3|U|4372
8FKY|1|L3|G|4373
8FKY|1|L3|U|4374
8FKY|1|L3|C|4375
8FKY|1|L3|A|4376
8FKY|1|L3|G|4377
8FKY|1|L3|A|4378
8FKY|1|L3|A|4379
8FKY|1|L3|A|4380

Current chains

Chain L3

28S rRNA

Nearby chains

Chain NH

60S ribosome subunit biogenesis protein NIP7 homolog

Chain ST

Ribosome biogenesis regulatory protein homolog