J3_8FKY_007

3D structure

PDB id

8FKY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State F)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CAU*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

8FKY|1|L3|U|4989, 8FKY|1|L3|C|4990, 8FKY|1|L3|A|5061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKY|1|L3|C|4970
8FKY|1|L3|A|4971
8FKY|1|L3|U|4972
*
8FKY|1|L3|G|4986
8FKY|1|L3|C|4987
8FKY|1|L3|U|4988
8FKY|1|L3|U|4989
8FKY|1|L3|C|4990
8FKY|1|L3|U|4991
*
8FKY|1|L3|A|5060
8FKY|1|L3|A|5061
8FKY|1|L3|G|5062
8FKY|1|L3|G|5063

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L17

Chain LN

60S ribosomal protein L3

Chain LP

60S ribosomal protein L31