J3_8FKY_013

3D structure

PDB id

8FKY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nucleolar pre-60S ribosomal subunit (State F)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

8FKY|1|L3|C|704, 8FKY|1|L3|C|1295

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FKY|1|L3|C|451
8FKY|1|L3|A|452
8FKY|1|L3|G|453
8FKY|1|L3|U|454
8FKY|1|L3|C|455
*
8FKY|1|L3|G|701
8FKY|1|L3|U|702
8FKY|1|L3|G|703
8FKY|1|L3|C|704
8FKY|1|L3|G|705
*
8FKY|1|L3|C|1292
8FKY|1|L3|G|1293
8FKY|1|L3|A|1294
8FKY|1|L3|C|1295
8FKY|1|L3|G|1296

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L32

Chain LT

60S ribosomal protein L35a

Chain SC

60S ribosomal protein L6