J3_8FL2_011

3D structure

PDB id

8FL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CA(PSU)UCG*CCUGCUUCU*AAGG

Length

19 nucleotides

Bulged bases

8FL2|1|L3|U|4989, 8FL2|1|L3|C|4990

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL2|1|L3|C|4970
8FL2|1|L3|A|4971
8FL2|1|L3|PSU|4972
8FL2|1|L3|U|4973
8FL2|1|L3|C|4974
8FL2|1|L3|G|4975
*
8FL2|1|L3|C|4983
8FL2|1|L3|C|4984
8FL2|1|L3|U|4985
8FL2|1|L3|G|4986
8FL2|1|L3|C|4987
8FL2|1|L3|U|4988
8FL2|1|L3|U|4989
8FL2|1|L3|C|4990
8FL2|1|L3|U|4991
*
8FL2|1|L3|A|5060
8FL2|1|L3|A|5061
8FL2|1|L3|G|5062
8FL2|1|L3|G|5063

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L17

Chain LN

60S ribosomal protein L3

Chain LP

60S ribosomal protein L31