J3_8FL2_016

3D structure

PDB id

8FL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State I1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.67 Å

Loop

Sequence

CAAG*CCCAGCCCGUGGAC*GGUAG

Length

23 nucleotides

Bulged bases

8FL2|1|L3|A|218, 8FL2|1|L3|G|219, 8FL2|1|L3|U|224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FL2|1|L3|C|196
8FL2|1|L3|A|197
8FL2|1|L3|A|198
8FL2|1|L3|G|199
*
8FL2|1|L3|C|215
8FL2|1|L3|C|216
8FL2|1|L3|C|217
8FL2|1|L3|A|218
8FL2|1|L3|G|219
8FL2|1|L3|C|220
8FL2|1|L3|C|221
8FL2|1|L3|C|222
8FL2|1|L3|G|223
8FL2|1|L3|U|224
8FL2|1|L3|G|225
8FL2|1|L3|G|226
8FL2|1|L3|A|227
8FL2|1|L3|C|228
*
8FL2|1|L3|G|240
8FL2|1|L3|G|241
8FL2|1|L3|U|242
8FL2|1|L3|A|243
8FL2|1|L3|G|244

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LI

60S ribosomal protein L26

Chain SA

60S ribosomal protein L4