J3_8FLB_025

3D structure

PDB id

8FLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CA(PSU)*GCUUCU*AAGG

Length

13 nucleotides

Bulged bases

8FLB|1|L3|U|4989, 8FLB|1|L3|C|4990

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLB|1|L3|C|4970
8FLB|1|L3|A|4971
8FLB|1|L3|PSU|4972
*
8FLB|1|L3|G|4986
8FLB|1|L3|C|4987
8FLB|1|L3|U|4988
8FLB|1|L3|U|4989
8FLB|1|L3|C|4990
8FLB|1|L3|U|4991
*
8FLB|1|L3|A|5060
8FLB|1|L3|A|5061
8FLB|1|L3|G|5062
8FLB|1|L3|G|5063

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L17

Chain LN

60S ribosomal protein L3

Chain LP

60S ribosomal protein L31