J3_8FLC_011

3D structure

PDB id

8FLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CA(PSU)UCG*CCUGCUUCU*AAGG

Length

19 nucleotides

Bulged bases

8FLC|1|L3|U|4989, 8FLC|1|L3|C|4990

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLC|1|L3|C|4970
8FLC|1|L3|A|4971
8FLC|1|L3|PSU|4972
8FLC|1|L3|U|4973
8FLC|1|L3|C|4974
8FLC|1|L3|G|4975
*
8FLC|1|L3|C|4983
8FLC|1|L3|C|4984
8FLC|1|L3|U|4985
8FLC|1|L3|G|4986
8FLC|1|L3|C|4987
8FLC|1|L3|U|4988
8FLC|1|L3|U|4989
8FLC|1|L3|C|4990
8FLC|1|L3|U|4991
*
8FLC|1|L3|A|5060
8FLC|1|L3|A|5061
8FLC|1|L3|G|5062
8FLC|1|L3|G|5063

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LA

60S ribosomal protein L17

Chain LN

60S ribosomal protein L3

Chain LP

60S ribosomal protein L31