J3_8FOM_067

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

GCAUC*GUU*AUUAAAGC

Length

16 nucleotides

Bulged bases

8FOM|1|RA|A|2518, 8FOM|1|RA|U|2519

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FOM|1|RA|G|2516
8FOM|1|RA|C|2517
8FOM|1|RA|A|2518
8FOM|1|RA|U|2519
8FOM|1|RA|C|2520
*
8FOM|1|RA|G|2545
8FOM|1|RA|U|2546
8FOM|1|RA|U|2547
*
8FOM|1|RA|A|2561
8FOM|1|RA|U|2562
8FOM|1|RA|U|2563
8FOM|1|RA|A|2564
8FOM|1|RA|A|2565
8FOM|1|RA|A|2566
8FOM|1|RA|G|2567
8FOM|1|RA|C|2568

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RN

50S ribosomal protein L13

Chain RO

50S ribosomal protein L14