J3_8FOM_071

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

UGGAG*CUAC*GGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FOM|1|XA|U|943
8FOM|1|XA|G|944
8FOM|1|XA|G|945
8FOM|1|XA|A|946
8FOM|1|XA|G|947
*
8FOM|1|XA|C|1234
8FOM|1|XA|U|1235
8FOM|1|XA|A|1236
8FOM|1|XA|C|1237
*
8FOM|1|XA|G|1337
8FOM|1|XA|G|1338
8FOM|1|XA|A|1339
8FOM|1|XA|A|1340

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XG

30S ribosomal protein S7

Chain XI

30S ribosomal protein S9

Chain XM

30S ribosomal protein S13

Chain XU

30S ribosomal protein Thx

Chain XV

Transfer RNA; tRNA