J3_8FOM_076

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

CGAAG*CGCCAGAGAGG*CCGUAG

Length

22 nucleotides

Bulged bases

8FOM|1|YA|G|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FOM|1|YA|C|297
8FOM|1|YA|G|298
8FOM|1|YA|A|299
8FOM|1|YA|A|300
8FOM|1|YA|G|301
*
8FOM|1|YA|C|316
8FOM|1|YA|G|317
8FOM|1|YA|C|318
8FOM|1|YA|C|319
8FOM|1|YA|A|320
8FOM|1|YA|G|321
8FOM|1|YA|A|322
8FOM|1|YA|G|323
8FOM|1|YA|A|324
8FOM|1|YA|G|325
8FOM|1|YA|G|326
*
8FOM|1|YA|C|336
8FOM|1|YA|C|337
8FOM|1|YA|G|338
8FOM|1|YA|U|339
8FOM|1|YA|A|340
8FOM|1|YA|G|341

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YF

50S ribosomal protein L4

Chain YY

50S ribosomal protein L24