J3_8FOM_083

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

CACG*CGGUAAG*CGAGG

Length

16 nucleotides

Bulged bases

8FOM|1|YA|A|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FOM|1|YA|C|2789
8FOM|1|YA|A|2790
8FOM|1|YA|C|2791
8FOM|1|YA|G|2792
*
8FOM|1|YA|C|2804
8FOM|1|YA|G|2805
8FOM|1|YA|G|2807
8FOM|1|YA|U|2808
8FOM|1|YA|A|2809
8FOM|1|YA|A|2810
8FOM|1|YA|G|2811
*
8FOM|1|YA|C|2889
8FOM|1|YA|G|2891
8FOM|1|YA|A|2892
8FOM|1|YA|G|2893
8FOM|1|YA|G|2894

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YE

50S ribosomal protein L3