J3_8FON_016
3D structure
- PDB id
- 8FON (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- CGAGCUA*UAG*CGAG
- Length
- 14 nucleotides
- Bulged bases
- 8FON|1|RA|G|686, 8FON|1|RA|G|792
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8FON_016 not in the Motif Atlas
- Homologous match to J3_7A0S_004
- Geometric discrepancy: 0.0772
- The information below is about J3_7A0S_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_46658.1
- Basepair signature
- cWW-tWH-cWW-tSW-F-F-cWW
- Number of instances in this motif group
- 10
Unit IDs
8FON|1|RA|C|683
8FON|1|RA|G|684
8FON|1|RA|A|685
8FON|1|RA|G|686
8FON|1|RA|C|687
8FON|1|RA|U|688
8FON|1|RA|A|689
*
8FON|1|RA|U|773
8FON|1|RA|A|774
8FON|1|RA|G|775
*
8FON|1|RA|C|791
8FON|1|RA|G|792
8FON|1|RA|A|793
8FON|1|RA|G|794
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R7
- 50S ribosomal protein L34
- Chain RD
- 50S ribosomal protein L2
Coloring options: