J3_8FR8_011
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CCC*GAUUGAU*AACCG
- Length
- 15 nucleotides
- Bulged bases
- 8FR8|1|A|U|3054, 8FR8|1|A|A|3056, 8FR8|1|A|C|3106
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FR8|1|A|C|3035
8FR8|1|A|C|3036
8FR8|1|A|C|3037
*
8FR8|1|A|G|3051
8FR8|1|A|A|3052
8FR8|1|A|U|3053
8FR8|1|A|U|3054
8FR8|1|A|G|3055
8FR8|1|A|A|3056
8FR8|1|A|U|3057
*
8FR8|1|A|A|3103
8FR8|1|A|A|3104
8FR8|1|A|C|3105
8FR8|1|A|C|3106
8FR8|1|A|G|3107
Current chains
- Chain A
- 23S rRNA (3119-MER)
Nearby chains
- Chain 8
- 50S ribosomal protein L32
- Chain J
- 50S ribosomal protein L17
- Chain L
- 50S ribosomal protein L3
Coloring options: