J3_8FR8_012
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- UCCAUAG*CGCC*GACA
- Length
- 15 nucleotides
- Bulged bases
- 8FR8|1|B|C|12, 8FR8|1|B|U|15
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8FR8|1|B|U|11
8FR8|1|B|C|12
8FR8|1|B|C|13
8FR8|1|B|A|14
8FR8|1|B|U|15
8FR8|1|B|A|16
8FR8|1|B|G|17
*
8FR8|1|B|C|69
8FR8|1|B|G|70
8FR8|1|B|C|71
8FR8|1|B|C|72
*
8FR8|1|B|G|104
8FR8|1|B|A|105
8FR8|1|B|C|106
8FR8|1|B|A|107
Current chains
- Chain B
- 5S rRNA (118-MER)
Nearby chains
- Chain 2
- 50S ribosomal protein L25
- Chain 4
- 50S ribosomal protein L27
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: