J3_8FR8_025

3D structure

PDB id

8FR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

UAUCUUU*AGG*CUUGAUGG

Length

18 nucleotides

Bulged bases

8FR8|1|A|U|330, 8FR8|1|A|U|445

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FR8|1|A|U|325
8FR8|1|A|A|326
8FR8|1|A|U|327
8FR8|1|A|C|328
8FR8|1|A|U|329
8FR8|1|A|U|330
8FR8|1|A|U|331
*
8FR8|1|A|A|350
8FR8|1|A|G|351
8FR8|1|A|G|352
*
8FR8|1|A|C|443
8FR8|1|A|U|444
8FR8|1|A|U|445
8FR8|1|A|G|446
8FR8|1|A|A|447
8FR8|1|A|U|448
8FR8|1|A|G|449
8FR8|1|A|G|450

Current chains

Chain A

23S rRNA (3119-MER)

Nearby chains