J3_8FTO_008
3D structure
- PDB id
- 8FTO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with an improved MS2 tag inserted in H98
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.85 Å
Loop
- Sequence
- UAU*AGAC*GGUG
- Length
- 11 nucleotides
- Bulged bases
- 8FTO|1|A|U|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8FTO_008 not in the Motif Atlas
- Homologous match to J3_5J7L_010
- Geometric discrepancy: 0.0957
- The information below is about J3_5J7L_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.4
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
8FTO|1|A|U|1116
8FTO|1|A|A|1117
8FTO|1|A|U|1118
*
8FTO|1|A|A|1155
8FTO|1|A|G|1156
8FTO|1|A|A|1157
8FTO|1|A|C|1158
*
8FTO|1|A|G|1181
8FTO|1|A|G|1182
8FTO|1|A|U|1183
8FTO|1|A|G|1184
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- 30S ribosomal protein S2
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14
Coloring options: