J3_8FZD_016

3D structure

PDB id

8FZD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAG*UGUGCC*GAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZD|1|a|G|1003
8FZD|1|a|A|1004
8FZD|1|a|A|1005
8FZD|1|a|G|1006
*
8FZD|1|a|U|1023
8FZD|1|a|G|1024
8FZD|1|a|U|1025
8FZD|1|a|G|1026
8FZD|1|a|C|1027
8FZD|1|a|C|1028
*
8FZD|1|a|G|1034
8FZD|1|a|A|1035
8FZD|1|a|A|1036
8FZD|1|a|C|1037

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14