J3_8FZF_003

3D structure

PDB id

8FZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGA*UUAAAG*CAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZF|1|A|G|1055
8FZF|1|A|G|1056
8FZF|1|A|A|1057
*
8FZF|1|A|U|1082
8FZF|1|A|U|1083
8FZF|1|A|A|1084
8FZF|1|A|A|1085
8FZF|1|A|A|1086
8FZF|1|A|G|1087
*
8FZF|1|A|C|1102
8FZF|1|A|A|1103
8FZF|1|A|C|1104

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain I

50S ribosomal protein L10

Chain J

50S ribosomal protein L11