J3_8FZF_033
3D structure
- PDB id
- 8FZF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8FZF_033 not in the Motif Atlas
- Homologous match to J3_5J7L_053
- Geometric discrepancy: 0.1873
- The information below is about J3_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8FZF|1|a|C|990
8FZF|1|a|U|991
8FZF|1|a|U|992
8FZF|1|a|G|993
8FZF|1|a|A|994
8FZF|1|a|C|995
8FZF|1|a|A|996
8FZF|1|a|U|997
*
8FZF|1|a|A|1044
8FZF|1|a|C|1045
8FZF|1|a|A|1046
8FZF|1|a|G|1047
*
8FZF|1|a|C|1210
8FZF|1|a|U|1211
8FZF|1|a|U|1212
8FZF|1|a|A|1213
8FZF|1|a|C|1214
8FZF|1|a|G|1215
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain n
- Small ribosomal subunit protein uS14
Coloring options: