J3_8FZH_035
3D structure
- PDB id
- 8FZH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUUGACAU*ACAG*CUUACG
- Length
- 18 nucleotides
- Bulged bases
- 8FZH|1|a|U|1212, 8FZH|1|a|C|1214
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8FZH_035 not in the Motif Atlas
- Homologous match to J3_5J7L_053
- Geometric discrepancy: 0.1434
- The information below is about J3_5J7L_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_76475.2
- Basepair signature
- cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8FZH|1|a|C|990
8FZH|1|a|U|991
8FZH|1|a|U|992
8FZH|1|a|G|993
8FZH|1|a|A|994
8FZH|1|a|C|995
8FZH|1|a|A|996
8FZH|1|a|U|997
*
8FZH|1|a|A|1044
8FZH|1|a|C|1045
8FZH|1|a|A|1046
8FZH|1|a|G|1047
*
8FZH|1|a|C|1210
8FZH|1|a|U|1211
8FZH|1|a|U|1212
8FZH|1|a|A|1213
8FZH|1|a|C|1214
8FZH|1|a|G|1215
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain n
- 30S ribosomal protein S14
- Chain w
- Peptide chain release factor 1
Coloring options: