J3_8G34_013

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGGAGCAUGU*ACGUGCUAC*GGAA

Length

23 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G34|1|v|U|943
8G34|1|v|G|944
8G34|1|v|G|945
8G34|1|v|A|946
8G34|1|v|G|947
8G34|1|v|C|948
8G34|1|v|A|949
8G34|1|v|U|950
8G34|1|v|G|951
8G34|1|v|U|952
*
8G34|1|v|A|1229
8G34|1|v|C|1230
8G34|1|v|G|1231
8G34|1|v|U|1232
8G34|1|v|G|1233
8G34|1|v|C|1234
8G34|1|v|U|1235
8G34|1|v|A|1236
8G34|1|v|C|1237
*
8G34|1|v|G|1337
8G34|1|v|G|1338
8G34|1|v|A|1339
8G34|1|v|A|1340

Current chains

Chain v

16S

Nearby chains

Chain h

30S ribosomal protein S9

Chain l

30S ribosomal protein S13