3D structure

PDB id
8G34 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GGUUUAAUUC*GAAGAACCUUACC*GGGCUACAC
Length
32 nucleotides
Bulged bases
8G34|1|v|A|975, 8G34|1|v|G|976
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G34|1|v|G|953
8G34|1|v|G|954
8G34|1|v|U|955
8G34|1|v|U|956
8G34|1|v|U|957
8G34|1|v|A|958
8G34|1|v|A|959
8G34|1|v|U|960
8G34|1|v|U|961
8G34|1|v|C|962
*
8G34|1|v|G|973
8G34|1|v|A|974
8G34|1|v|A|975
8G34|1|v|G|976
8G34|1|v|A|977
8G34|1|v|A|978
8G34|1|v|C|979
8G34|1|v|C|980
8G34|1|v|U|981
8G34|1|v|U|982
8G34|1|v|A|983
8G34|1|v|C|984
8G34|1|v|C|985
*
8G34|1|v|G|1220
8G34|1|v|G|1221
8G34|1|v|G|1222
8G34|1|v|C|1223
8G34|1|v|U|1224
8G34|1|v|A|1225
8G34|1|v|C|1226
8G34|1|v|A|1227
8G34|1|v|C|1228

Current chains

Chain v
16S

Nearby chains

Chain i
30S ribosomal protein S10
Chain l
30S ribosomal protein S13
Chain m
30S ribosomal protein S14
Chain r
30S ribosomal protein S19

Coloring options:

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