J3_8G38_013

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGGAGCAUG*CGUGCUAC*GGAA

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G38|1|v|U|943
8G38|1|v|G|944
8G38|1|v|G|945
8G38|1|v|A|946
8G38|1|v|G|947
8G38|1|v|C|948
8G38|1|v|A|949
8G38|1|v|U|950
8G38|1|v|G|951
*
8G38|1|v|C|1230
8G38|1|v|G|1231
8G38|1|v|U|1232
8G38|1|v|G|1233
8G38|1|v|C|1234
8G38|1|v|U|1235
8G38|1|v|A|1236
8G38|1|v|C|1237
*
8G38|1|v|G|1337
8G38|1|v|G|1338
8G38|1|v|A|1339
8G38|1|v|A|1340

Current chains

Chain v

16S

Nearby chains

Chain f

30S ribosomal protein S7

Chain h

30S ribosomal protein S9

Chain l

30S ribosomal protein S13