J3_8G38_024
3D structure
- PDB id
- 8G38 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUGC*GCGGCCGUAACUAUAACGGUCCUAAGGUAG*CGAAUG
- Length
- 40 nucleotides
- Bulged bases
- 8G38|1|B|C|1909, 8G38|1|B|C|1914, 8G38|1|B|C|1920, 8G38|1|B|G|1921, 8G38|1|B|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8G38|1|B|C|1833
8G38|1|B|U|1834
8G38|1|B|G|1835
8G38|1|B|C|1836
*
8G38|1|B|G|1904
8G38|1|B|C|1905
8G38|1|B|G|1906
8G38|1|B|G|1907
8G38|1|B|C|1908
8G38|1|B|C|1909
8G38|1|B|G|1910
8G38|1|B|U|1911
8G38|1|B|A|1912
8G38|1|B|A|1913
8G38|1|B|C|1914
8G38|1|B|U|1915
8G38|1|B|A|1916
8G38|1|B|U|1917
8G38|1|B|A|1918
8G38|1|B|A|1919
8G38|1|B|C|1920
8G38|1|B|G|1921
8G38|1|B|G|1922
8G38|1|B|U|1923
8G38|1|B|C|1924
8G38|1|B|C|1925
8G38|1|B|U|1926
8G38|1|B|A|1927
8G38|1|B|A|1928
8G38|1|B|G|1929
8G38|1|B|G|1930
8G38|1|B|U|1931
8G38|1|B|A|1932
8G38|1|B|G|1933
*
8G38|1|B|C|1967
8G38|1|B|G|1968
8G38|1|B|A|1969
8G38|1|B|A|1970
8G38|1|B|U|1971
8G38|1|B|G|1972
Current chains
- Chain B
- 23S
Nearby chains
- Chain 6
- GTPase HflX
- Chain C
- 50S ribosomal protein L2
- Chain v
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: