J3_8G38_026

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAAUC*GAGGUUAG*CAUAAG

Length

20 nucleotides

Bulged bases

8G38|1|B|U|2334, 8G38|1|B|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G38|1|B|C|2295
8G38|1|B|U|2296
8G38|1|B|A|2297
8G38|1|B|A|2298
8G38|1|B|U|2299
8G38|1|B|C|2300
*
8G38|1|B|G|2316
8G38|1|B|A|2317
8G38|1|B|G|2318
8G38|1|B|G|2319
8G38|1|B|U|2320
8G38|1|B|U|2321
8G38|1|B|A|2322
8G38|1|B|G|2323
*
8G38|1|B|C|2332
8G38|1|B|A|2333
8G38|1|B|U|2334
8G38|1|B|A|2335
8G38|1|B|A|2336
8G38|1|B|G|2337

Current chains

Chain B

23S

Nearby chains

Chain A

5S ribosomal RNA; 5S rRNA

Chain F

50S ribosomal protein L5

Chain O

50S ribosomal protein L18

Chain W

50S ribosomal protein L27