J3_8G5Z_029

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

8G5Z|1|L5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|L5|C|451
8G5Z|1|L5|A|452
8G5Z|1|L5|G|453
8G5Z|1|L5|U|454
8G5Z|1|L5|C|455
*
8G5Z|1|L5|G|701
8G5Z|1|L5|U|702
8G5Z|1|L5|G|703
8G5Z|1|L5|C|704
8G5Z|1|L5|G|705
*
8G5Z|1|L5|C|1292
8G5Z|1|L5|G|1293
8G5Z|1|L5|A|1294
8G5Z|1|L5|C|1295
8G5Z|1|L5|G|1296

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

eL6

Chain Le

60S ribosomal protein L32

Chain Lf

60S ribosomal protein L35a