3D structure

PDB id
8G60 (explore in PDB, NAKB, or RNA 3D Hub)
Description
mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.54 Å

Loop

Sequence
CAGCG*CGUACG*CCGG
Length
15 nucleotides
Bulged bases
8G60|1|L5|C|159
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8G60|1|L5|C|112
8G60|1|L5|A|113
8G60|1|L5|G|114
8G60|1|L5|C|115
8G60|1|L5|G|116
*
8G60|1|L5|C|155
8G60|1|L5|G|156
8G60|1|L5|U|157
8G60|1|L5|A|158
8G60|1|L5|C|159
8G60|1|L5|G|160
*
8G60|1|L5|C|275
8G60|1|L5|C|276
8G60|1|L5|G|277
8G60|1|L5|G|278

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LG
eL8
Chain LL
eL13
Chain LN
eL15
Chain Lh
uL29
Chain Li
eL36

Coloring options:

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