J3_8G60_012

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CA(PSU)UCG*CCUGCUUCU*AAGG

Length

19 nucleotides

Bulged bases

8G60|1|L5|U|4989

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|C|4970
8G60|1|L5|A|4971
8G60|1|L5|PSU|4972
8G60|1|L5|U|4973
8G60|1|L5|C|4974
8G60|1|L5|G|4975
*
8G60|1|L5|C|4983
8G60|1|L5|C|4984
8G60|1|L5|U|4985
8G60|1|L5|G|4986
8G60|1|L5|C|4987
8G60|1|L5|U|4988
8G60|1|L5|U|4989
8G60|1|L5|C|4990
8G60|1|L5|U|4991
*
8G60|1|L5|A|5060
8G60|1|L5|A|5061
8G60|1|L5|G|5062
8G60|1|L5|G|5063

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

uL3

Chain LP

uL22

Chain Ld

eL31