J3_8G60_016

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CAUUC*GGACCAGAG*CAUU(PSU)G

Length

20 nucleotides

Bulged bases

8G60|1|S2|G|991

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|S2|C|937
8G60|1|S2|A|938
8G60|1|S2|U|939
8G60|1|S2|U|940
8G60|1|S2|C|941
*
8G60|1|S2|G|985
8G60|1|S2|G|986
8G60|1|S2|A|987
8G60|1|S2|C|988
8G60|1|S2|C|989
8G60|1|S2|A|990
8G60|1|S2|G|991
8G60|1|S2|A|992
8G60|1|S2|G|993
*
8G60|1|S2|C|1000
8G60|1|S2|A|1001
8G60|1|S2|U|1002
8G60|1|S2|U|1003
8G60|1|S2|PSU|1004
8G60|1|S2|G|1005

Current chains

Chain S2

18S rRNA

Nearby chains

Chain Lp

eL43

Chain SB

eS1

Chain SN

uS15

Chain SO

uS11

Chain Sa

eS26