J3_8G60_029

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CAGUC*GUGCG*CGACG

Length

15 nucleotides

Bulged bases

8G60|1|L5|C|704

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|C|451
8G60|1|L5|A|452
8G60|1|L5|G|453
8G60|1|L5|U|454
8G60|1|L5|C|455
*
8G60|1|L5|G|701
8G60|1|L5|U|702
8G60|1|L5|G|703
8G60|1|L5|C|704
8G60|1|L5|G|705
*
8G60|1|L5|C|1292
8G60|1|L5|G|1293
8G60|1|L5|A|1294
8G60|1|L5|C|1295
8G60|1|L5|G|1296

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

eL6

Chain Le

eL32

Chain Lf

eL33

Chain Lr

eL28