J3_8G7Q_007

3D structure

PDB id

8G7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAGG*CCGACCUU*AAUAC

Length

18 nucleotides

Bulged bases

8G7Q|1|A|A|2171, 8G7Q|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G7Q|1|A|G|2124
8G7Q|1|A|G|2125
8G7Q|1|A|A|2126
8G7Q|1|A|G|2127
8G7Q|1|A|G|2128
*
8G7Q|1|A|C|2160
8G7Q|1|A|C|2161
8G7Q|1|A|G|2162
8G7Q|1|A|A|2163
8G7Q|1|A|C|2164
8G7Q|1|A|C|2165
8G7Q|1|A|U|2166
8G7Q|1|A|U|2167
*
8G7Q|1|A|A|2170
8G7Q|1|A|A|2171
8G7Q|1|A|U|2172
8G7Q|1|A|A|2173
8G7Q|1|A|C|2174

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain y

Transfer RNA; tRNA