J3_8G7R_023

3D structure

PDB id

8G7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAAG*CGCGAUACAG*CGUAC

Length

20 nucleotides

Bulged bases

8G7R|1|A|U|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8G7R_023 not in the Motif Atlas

Homologous match to J3_5J7L_068

Geometric discrepancy: 0.0981

The information below is about J3_5J7L_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_46299.2

Basepair signature

cWW-F-F-F-cHH-cWW-tHS-F-cWW-cSW-tHS-cWW

Number of instances in this motif group

3

Unit IDs

8G7R|1|A|G|297
8G7R|1|A|G|298
8G7R|1|A|A|299
8G7R|1|A|A|300
8G7R|1|A|G|301
*
8G7R|1|A|C|316
8G7R|1|A|G|317
8G7R|1|A|C|318
8G7R|1|A|G|319
8G7R|1|A|A|320
8G7R|1|A|U|321
8G7R|1|A|A|322
8G7R|1|A|C|323
8G7R|1|A|A|324
8G7R|1|A|G|325
*
8G7R|1|A|C|337
8G7R|1|A|G|338
8G7R|1|A|U|339
8G7R|1|A|A|340
8G7R|1|A|C|341

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain W

50S ribosomal protein L24