J3_8G7S_001

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAUCUA*UGG*CAAA

Length

14 nucleotides

Bulged bases

8G7S|1|A|U|686, 8G7S|1|A|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8G7S_001 not in the Motif Atlas

Homologous match to J3_5J7L_038

Geometric discrepancy: 0.0833

The information below is about J3_5J7L_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_64189.2

Basepair signature

cWW-tWH-cWW-tSW-F-F-cWW

Number of instances in this motif group

7

Unit IDs

8G7S|1|A|U|683
8G7S|1|A|G|684
8G7S|1|A|A|685
8G7S|1|A|U|686
8G7S|1|A|C|687
8G7S|1|A|U|688
8G7S|1|A|A|689
*
8G7S|1|A|U|773
8G7S|1|A|G|774
8G7S|1|A|G|775
*
8G7S|1|A|C|791
8G7S|1|A|A|792
8G7S|1|A|A|793
8G7S|1|A|A|794

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L34

Chain C

50S ribosomal protein L2