J3_8G7S_036

3D structure

PDB id

8G7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUGACAU*ACAG*CUUACG

Length

18 nucleotides

Bulged bases

8G7S|1|a|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_8G7S_036 not in the Motif Atlas

Homologous match to J3_5J7L_053

Geometric discrepancy: 0.1546

The information below is about J3_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_76475.2

Basepair signature

cWW-tWH-F-tHS-cWW-cWW-F-cWS-cWS-cWW

Number of instances in this motif group

2

Unit IDs

8G7S|1|a|C|990
8G7S|1|a|U|991
8G7S|1|a|U|992
8G7S|1|a|G|993
8G7S|1|a|A|994
8G7S|1|a|C|995
8G7S|1|a|A|996
8G7S|1|a|U|997
*
8G7S|1|a|A|1044
8G7S|1|a|C|1045
8G7S|1|a|A|1046
8G7S|1|a|G|1047
*
8G7S|1|a|C|1210
8G7S|1|a|U|1211
8G7S|1|a|U|1212
8G7S|1|a|A|1213
8G7S|1|a|C|1214
8G7S|1|a|G|1215

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14