J3_8HL4_006

3D structure

PDB id

8HL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.62 Å

Loop

Sequence

UGU*AUGUC*GCAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL4|1|A16S|U|1037
8HL4|1|A16S|G|1038
8HL4|1|A16S|U|1039
*
8HL4|1|A16S|A|1046
8HL4|1|A16S|U|1047
8HL4|1|A16S|G|1048
8HL4|1|A16S|U|1049
8HL4|1|A16S|C|1050
*
8HL4|1|A16S|G|1063
8HL4|1|A16S|C|1064
8HL4|1|A16S|A|1065
8HL4|1|A16S|A|1066

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain AS2P

30S ribosomal protein S2

Chain AS5P

30S ribosomal protein S5