J3_8HL4_012

3D structure

PDB id

8HL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.62 Å

Loop

Sequence

GAAG*CUCUAAGG*CAC

Length

15 nucleotides

Bulged bases

8HL4|1|A23S|A|1224

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL4|1|A23S|G|1195
8HL4|1|A23S|A|1196
8HL4|1|A23S|A|1197
8HL4|1|A23S|G|1198
*
8HL4|1|A23S|C|1220
8HL4|1|A23S|U|1221
8HL4|1|A23S|C|1222
8HL4|1|A23S|U|1223
8HL4|1|A23S|A|1224
8HL4|1|A23S|A|1225
8HL4|1|A23S|G|1226
8HL4|1|A23S|G|1227
*
8HL4|1|A23S|C|1242
8HL4|1|A23S|A|1243
8HL4|1|A23S|C|1244

Current chains

Chain A23S

23s rRNA (3000-MER)

Nearby chains