J3_8HL4_025

3D structure

PDB id

8HL4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.62 Å

Loop

Sequence

GG*CACCAGUGG*CGC

Length

14 nucleotides

Bulged bases

8HL4|1|A16S|U|689

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8HL4|1|A16S|G|638
8HL4|1|A16S|G|639
*
8HL4|1|A16S|C|683
8HL4|1|A16S|A|684
8HL4|1|A16S|C|685
8HL4|1|A16S|C|686
8HL4|1|A16S|A|687
8HL4|1|A16S|G|688
8HL4|1|A16S|U|689
8HL4|1|A16S|G|690
8HL4|1|A16S|G|691
*
8HL4|1|A16S|C|698
8HL4|1|A16S|G|699
8HL4|1|A16S|C|700

Current chains

Chain A16S

16s rRNA (1493-MER)

Nearby chains

Chain S11P

30S ribosomal protein S11

Chain S3AE

30S ribosomal protein S3Ae