J3_8HL4_027
3D structure
- PDB id
- 8HL4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structures and Translocation Mechanism of Crenarchaeota Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.62 Å
Loop
- Sequence
- CUCAAUUG*CUGGAAUCUUAC*GCCG
- Length
- 24 nucleotides
- Bulged bases
- 8HL4|1|A16S|G|946, 8HL4|1|A16S|G|947, 8HL4|1|A16S|A|949
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8HL4|1|A16S|C|926
8HL4|1|A16S|U|927
8HL4|1|A16S|C|928
8HL4|1|A16S|A|929
8HL4|1|A16S|A|930
8HL4|1|A16S|U|931
8HL4|1|A16S|U|932
8HL4|1|A16S|G|933
*
8HL4|1|A16S|C|944
8HL4|1|A16S|U|945
8HL4|1|A16S|G|946
8HL4|1|A16S|G|947
8HL4|1|A16S|A|948
8HL4|1|A16S|A|949
8HL4|1|A16S|U|950
8HL4|1|A16S|C|951
8HL4|1|A16S|U|952
8HL4|1|A16S|U|953
8HL4|1|A16S|A|954
8HL4|1|A16S|C|955
*
8HL4|1|A16S|G|1192
8HL4|1|A16S|C|1193
8HL4|1|A16S|C|1194
8HL4|1|A16S|G|1195
Current chains
- Chain A16S
- 16s rRNA (1493-MER)
Nearby chains
- Chain AEFG
- Elongation factor 2
- Chain S10P
- 30S ribosomal protein S10
- Chain S13P
- 30S ribosomal protein S13
- Chain S14P
- 30S ribosomal protein S14 type Z
- Chain S19P
- 30S ribosomal protein S19
- Chain S27A
- 30S ribosomal protein S27ae
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