J3_8HSP_013
3D structure
- PDB id
- 8HSP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- CAAG*CCCAAAC*GUG
- Length
- 14 nucleotides
- Bulged bases
- 8HSP|1|a|A|1609
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_8HSP_013 not in the Motif Atlas
- Homologous match to J3_7RQB_008
- Geometric discrepancy: 0.0751
- The information below is about J3_7RQB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_16623.1
- Basepair signature
- cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
8HSP|1|a|C|1306
8HSP|1|a|A|1307
8HSP|1|a|A|1308
8HSP|1|a|G|1309
*
8HSP|1|a|C|1605
8HSP|1|a|C|1606
8HSP|1|a|C|1607
8HSP|1|a|A|1608
8HSP|1|a|A|1609
8HSP|1|a|A|1610
8HSP|1|a|C|1611
*
8HSP|1|a|G|1620
8HSP|1|a|U|1621
8HSP|1|a|G|1622
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L34
Coloring options: