J3_8IE3_024

3D structure

PDB id

8IE3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

human nuclear pre-60S ribosomal particle - State E

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GCUC*GAGC*GCAAAAGC

Length

16 nucleotides

Bulged bases

8IE3|1|2|A|4280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8IE3|1|2|G|4240
8IE3|1|2|C|4241
8IE3|1|2|U|4242
8IE3|1|2|C|4243
*
8IE3|1|2|G|4267
8IE3|1|2|A|4268
8IE3|1|2|G|4269
8IE3|1|2|C|4270
*
8IE3|1|2|G|4277
8IE3|1|2|C|4278
8IE3|1|2|A|4279
8IE3|1|2|A|4280
8IE3|1|2|A|4281
8IE3|1|2|A|4282
8IE3|1|2|G|4283
8IE3|1|2|C|4284

Current chains

Chain 2

28S rRNA

Nearby chains

Chain T

60S ribosomal protein L11

Chain c

60S ribosomal protein L21

Chain r

60S ribosomal protein L5