3D structure

PDB id
8INF (explore in PDB, NAKB, or RNA 3D Hub)
Description
human nuclear pre-60S ribosomal particle - State F'
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CAGUC*GUGCG*CGACG
Length
15 nucleotides
Bulged bases
8INF|1|2|C|704, 8INF|1|2|C|1295
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8INF|1|2|C|451
8INF|1|2|A|452
8INF|1|2|G|453
8INF|1|2|U|454
8INF|1|2|C|455
*
8INF|1|2|G|701
8INF|1|2|U|702
8INF|1|2|G|703
8INF|1|2|C|704
8INF|1|2|G|705
*
8INF|1|2|C|1292
8INF|1|2|G|1293
8INF|1|2|A|1294
8INF|1|2|C|1295
8INF|1|2|G|1296

Current chains

Chain 2
28S rRNA

Nearby chains

Chain k
60S ribosomal protein L32
Chain l
60S ribosomal protein L28
Chain n
60S ribosomal protein L35a
Chain o
60S ribosomal protein L6

Coloring options:

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