J3_8JSH_003

3D structure

PDB id

8JSH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 30S-body-IF3 complex from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GCCUAAC*GGGGAAUAUUG*CAGC

Length

22 nucleotides

Bulged bases

8JSH|1|g|C|48, 8JSH|1|g|A|51, 8JSH|1|g|U|368

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8JSH|1|g|G|46
8JSH|1|g|C|47
8JSH|1|g|C|48
8JSH|1|g|U|49
8JSH|1|g|A|50
8JSH|1|g|A|51
8JSH|1|g|C|52
*
8JSH|1|g|G|359
8JSH|1|g|G|360
8JSH|1|g|G|361
8JSH|1|g|G|362
8JSH|1|g|A|363
8JSH|1|g|A|364
8JSH|1|g|U|365
8JSH|1|g|A|366
8JSH|1|g|U|367
8JSH|1|g|U|368
8JSH|1|g|G|369
*
8JSH|1|g|C|392
8JSH|1|g|A|393
8JSH|1|g|G|394
8JSH|1|g|C|395

Current chains

Chain g

16S ribosomal RNA

Nearby chains

Chain t

Small ribosomal subunit protein uS12

Chain y

30S ribosomal protein S16